Microbiome Sequencing is a sophisticated molecular technique used in clinical diagnostics and research to identify and quantify the diverse population of microorganisms, including bacteria, fungi, and viruses, inhabiting a specific ecological niche, most commonly the gastrointestinal tract. This process involves sequencing the genetic material of the microbial community, providing a detailed map of the gut’s composition and functional potential. The resulting data offers crucial insight into the gut-brain and gut-hormone axes.
Origin
This term is rooted in molecular biology and genomics, utilizing next-generation sequencing technology to analyze the microbiome, the collective genome of the microbes. The clinical application has rapidly expanded with the recognition of the gut’s profound influence on systemic health and endocrine function.
Mechanism
The process typically involves extracting DNA from a stool sample, followed by sequencing a conserved gene region, such as the 16S rRNA gene for bacteria, to identify the species present. Bioinformatic analysis then compares these sequences to large databases to determine the relative abundance and diversity of the microbial community. This detailed profile allows clinicians to correlate specific microbial imbalances, or dysbiosis, with clinical presentations, including chronic inflammation and metabolic syndrome.
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